CDS

Accession Number TCMCG023C18813
gbkey CDS
Protein Id PIN08423.1
Location join(114708..114794,115963..116024,117244..117346,118254..118330,118398..118459,118561..118648,118757..118832,118921..118951,119626..119745,120291..120376,120925..121098,122026..122280)
Organism Handroanthus impetiginosus
locus_tag CDL12_19005

Protein

Length 406aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA324125, BioSample:SAMN05195323
db_source NKXS01003821.1
Definition Apoptosis-promoting RNA-binding protein TIA-1/TIAR (RRM superfamily) [Handroanthus impetiginosus]
Locus_tag CDL12_19005

EGGNOG-MAPPER Annotation

COG_category A
Description Oligouridylate-binding protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K13201        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000323        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005764        [VIEW IN EMBL-EBI]
GO:0005773        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006357        [VIEW IN EMBL-EBI]
GO:0006915        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006952        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007165        [VIEW IN EMBL-EBI]
GO:0007166        [VIEW IN EMBL-EBI]
GO:0007167        [VIEW IN EMBL-EBI]
GO:0007169        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008219        [VIEW IN EMBL-EBI]
GO:0008543        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010494        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0012501        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0035770        [VIEW IN EMBL-EBI]
GO:0036464        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044344        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070848        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0071310        [VIEW IN EMBL-EBI]
GO:0071363        [VIEW IN EMBL-EBI]
GO:0071495        [VIEW IN EMBL-EBI]
GO:0071774        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCATCAGCAGAGGCTGAAGCAGCAGCAGCAGCAAGCACTGATGCAGCAATCTCTTTACCATCCGGGTCTCCTGGCTGCTCCTCAGATAGAGCCTATCTTGAGTGGAAATCTGCCACCTGGATTCGATTCAAGAACATGCCGCAGTGTTTATGTTGGAAATGTGCACCCACAAGTTACTGAACCTCTTCTTCAAGAAGTTTTCTCTAGTACTGGTCCTCTTGAAGGCTGCAAGCTTATTCGAAAAGATAAGTCATCCTATGGTTTTGTGGATTACTTTGATCGTCGATCAGCTGCCCTCGCTATCGTGACTCTGAATGGCAGGCATTTGTTTGGACAGCCTATAAAGGTCAATTGGGCATATGCTAGTGCTCAGAGAGAGGACACATCAAATCACTTCAACATTTTTGTCGGTGATCTTAGCCCGGAGGTTACTGATGCTACCTTATTTGCATGCTTCTCTGTTTATCCTACTTGCTCAGATGCAAGGGTTATGTGGGATCAGAAGACTGGCCGGTCAAGGGGTTTTGGTTTTGTTTCTTTTCGCAGTCAGCAGGATGCTCAAAGTGCAATAAATGACTTGAATGGGAAGTGGCTTGGAAGTAGACAAATTCGCTGCAATTGGGCTGCAAAAGGTGCTGGCGCAGTCGATGACCAGCAGTCCTCTGATTCAAAAAATGTTGTGGAATTAACGAATGGAACATCAGAAGATGGGCAAGAAAAGAGGAATGAAGATGCTCCAGAAAATAATCCACAGTACACAACTGTCTATGTTGGCAATCTGGCTCCTGAAGTCACATCAGTTGACCTCCATCGCCATTTTCATGCACTTGGTGTTGGAGTAATTGAGGATGTCCGCATTCAAAGAGACAAAGGTTTTGGGTTCGTTAGGTACAGCAGCCATGCTGAAGCTGCCCGTGCTATCCAGATGGGAAATGCTCGGATTCTTTTTGGCAAACCGATTAAGTGCTCATGGGGTAGTAAGCCCACTCCTCCTGGGACCAGCTCTGCACCGCTACCTCCACCAGCTGCATCACATGTACCTGGCTTTACAGCAGCTGATCTTGCTGCCTATGAACGCCAACTTGCTATGAGTAAAATGGGTACCGCTCAAGCTCTAATGGGTCAACAGGGTCAGCGTCTTGGTGCTGCAACTCAAGCCATCTATGATGCTGGATATTCCAGCATTGCTGCCACCCAGCCACCCATGTATTACCAGTAA
Protein:  
MHQQRLKQQQQQALMQQSLYHPGLLAAPQIEPILSGNLPPGFDSRTCRSVYVGNVHPQVTEPLLQEVFSSTGPLEGCKLIRKDKSSYGFVDYFDRRSAALAIVTLNGRHLFGQPIKVNWAYASAQREDTSNHFNIFVGDLSPEVTDATLFACFSVYPTCSDARVMWDQKTGRSRGFGFVSFRSQQDAQSAINDLNGKWLGSRQIRCNWAAKGAGAVDDQQSSDSKNVVELTNGTSEDGQEKRNEDAPENNPQYTTVYVGNLAPEVTSVDLHRHFHALGVGVIEDVRIQRDKGFGFVRYSSHAEAARAIQMGNARILFGKPIKCSWGSKPTPPGTSSAPLPPPAASHVPGFTAADLAAYERQLAMSKMGTAQALMGQQGQRLGAATQAIYDAGYSSIAATQPPMYYQ